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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs794615 chr6:119285581 C/T ACTR3C chr7:149941005-150020814:- 1.01 7.8 2.6E-10 Box Plot
ACC rs79500216 chr6:18770309 G/C PRHOXNB chr13:28552243-28562774:- 0.6 7.81 2.57E-10 Box Plot
ACC rs79546311 chr13:60794296 TA/T PRAMEF16 chr1:13495254-13498260:+ 0.73 8.74 8.63E-12 Box Plot
ACC rs79594981 chr2:124913792 G/A GC chr4:72607410-72669758:- 0.68 9.87 1.65E-13 Box Plot
ACC rs79655078 chr8:4528195 T/G PRHOXNB chr13:28552243-28562774:- 0.64 7.51 7.58E-10 Box Plot
ACC rs79669355 chr3:116072174 C/T OR6C3 chr12:55725485-55726420:+ 1.05 8.34 3.71E-11 Box Plot
ACC rs79707712 chr7:18819463 C/G TFDP3 chrX:132350697-132352376:- 1.05 10.52 1.78E-14 Box Plot
ACC rs798379 chr2:16892189 T/C TFDP3 chrX:132350697-132352376:- 1.14 9.24 1.48E-12 Box Plot
ACC rs798380 chr2:16891856 G/C TFDP3 chrX:132350697-132352376:- 1.14 9.24 1.48E-12 Box Plot
ACC rs79847338 chr15:27228431 G/A PRHOXNB chr13:28552243-28562774:- 0.61 7.59 5.7E-10 Box Plot
ACC rs79919502 chr6:161472608 T/C PRHOXNB chr13:28552243-28562774:- 0.59 7.7 3.85E-10 Box Plot
ACC rs79921314 chr2:191254511 A/G PRHOXNB chr13:28552243-28562774:- 0.68 8.16 7.13E-11 Box Plot
ACC rs7993677 chr13:59649191 C/T SERPINB9 chr6:2887500-2903514:- -1.29 -7.84 2.24E-10 Box Plot
ACC rs79941590 chr6:62265358 C/A PRHOXNB chr13:28552243-28562774:- 0.59 7.82 2.45E-10 Box Plot
ACC rs80025480 chr5:120323571 T/C GAGE2D chrX:49207160-49214420:+ 1.22 11.62 4.6E-16 Box Plot